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hl7 priv samples MolecularSequence MolecularSequence-example-pgx-2.json
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priv/samples/MolecularSequence/MolecularSequence-example-pgx-2.json

{"resourceType":"MolecularSequence","id":"example-pgx-2","text":{"status":"generated","div":"\u003cdiv xmlns\u003d\"http://www.w3.org/1999/xhtml\"\u003e\u003cp\u003e\u003cb\u003eGenerated Narrative: MolecularSequence\u003c/b\u003e\u003ca name\u003d\"example-pgx-2\"\u003e \u003c/a\u003e\u003c/p\u003e\u003cdiv style\u003d\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"\u003e\u003cp style\u003d\"margin-bottom: 0px\"\u003eResource MolecularSequence \u0026quot;example-pgx-2\u0026quot; \u003c/p\u003e\u003c/div\u003e\u003cp\u003e\u003cb\u003etype\u003c/b\u003e: dna\u003c/p\u003e\u003cp\u003e\u003cb\u003esubject\u003c/b\u003e: \u003ca href\u003d\"patient-example.html\"\u003ePatient/example\u003c/a\u003e \u0026quot;Peter CHALMERS\u0026quot;\u003c/p\u003e\u003cblockquote\u003e\u003cp\u003e\u003cb\u003erelative\u003c/b\u003e\u003c/p\u003e\u003cp\u003e\u003cb\u003ecoordinateSystem\u003c/b\u003e: 0-based interval counting \u003cspan style\u003d\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"\u003e (\u003ca href\u003d\"https://loinc.org/\"\u003eLOINC\u003c/a\u003e#LA30100-4)\u003c/span\u003e\u003c/p\u003e\u003ch3\u003eStartingSequences\u003c/h3\u003e\u003ctable class\u003d\"grid\"\u003e\u003ctr\u003e\u003ctd\u003e-\u003c/td\u003e\u003ctd\u003e\u003cb\u003eSequence[x]\u003c/b\u003e\u003c/td\u003e\u003ctd\u003e\u003cb\u003eWindowStart\u003c/b\u003e\u003c/td\u003e\u003ctd\u003e\u003cb\u003eWindowEnd\u003c/b\u003e\u003c/td\u003e\u003ctd\u003e\u003cb\u003eOrientation\u003c/b\u003e\u003c/td\u003e\u003ctd\u003e\u003cb\u003eStrand\u003c/b\u003e\u003c/td\u003e\u003c/tr\u003e\u003ctr\u003e\u003ctd\u003e*\u003c/td\u003e\u003ctd\u003eNG_007726.3 \u003cspan style\u003d\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"\u003e (nuccore#NG_007726.3)\u003c/span\u003e\u003c/td\u003e\u003ctd\u003e55227970\u003c/td\u003e\u003ctd\u003e55227980\u003c/td\u003e\u003ctd\u003esense\u003c/td\u003e\u003ctd\u003ewatson\u003c/td\u003e\u003c/tr\u003e\u003c/table\u003e\u003ch3\u003eEdits\u003c/h3\u003e\u003ctable class\u003d\"grid\"\u003e\u003ctr\u003e\u003ctd\u003e-\u003c/td\u003e\u003ctd\u003e\u003cb\u003eStart\u003c/b\u003e\u003c/td\u003e\u003ctd\u003e\u003cb\u003eEnd\u003c/b\u003e\u003c/td\u003e\u003ctd\u003e\u003cb\u003eReplacementSequence\u003c/b\u003e\u003c/td\u003e\u003ctd\u003e\u003cb\u003eReplacedSequence\u003c/b\u003e\u003c/td\u003e\u003c/tr\u003e\u003ctr\u003e\u003ctd\u003e*\u003c/td\u003e\u003ctd\u003e55227978\u003c/td\u003e\u003ctd\u003e55227979\u003c/td\u003e\u003ctd\u003eG\u003c/td\u003e\u003ctd\u003eT\u003c/td\u003e\u003c/tr\u003e\u003c/table\u003e\u003c/blockquote\u003e\u003c/div\u003e"},"type":"dna","subject":{"reference":"Patient/example"},"relative":[{"coordinateSystem":{"coding":[{"system":"http://loinc.org","code":"LA30100-4","display":"0-based interval counting"}]},"startingSequence":{"sequenceCodeableConcept":{"coding":[{"system":"http://www.ncbi.nlm.nih.gov/nuccore","code":"NG_007726.3"}]},"windowStart":55227970,"windowEnd":55227980,"orientation":"sense","strand":"watson"},"edit":[{"start":55227978,"end":55227979,"replacementSequence":"G","replacedSequence":"T"}]}],"meta":{"tag":[{"system":"http://terminology.hl7.org/CodeSystem/v3-ActReason","code":"HTEST","display":"test health data"}]}}